Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Gm24447-201ENSMUST00000083977 338 ntBASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vcpip1Q8CDG3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Gm29667-201ENSMUST00000190817 490 ntBASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Vcpip1Q8CDG3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Vcpip1Q8CDG3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.27□□□□□ -0.12
Vcpip1Q8CDG3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vcpip1Q8CDG3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vcpip1Q8CDG3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vcpip1Q8CDG3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vcpip1Q8CDG3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vcpip1Q8CDG3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vcpip1Q8CDG3 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Gm20445-201ENSMUST00000061905 565 ntBASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vcpip1Q8CDG3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms