Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Mir698-201ENSMUST00000102164 109 ntBASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Gm6912-201ENSMUST00000117218 544 ntBASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Gm5425-201ENSMUST00000214125 459 ntBASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Gm17795-201ENSMUST00000214505 757 ntBASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trerf1Q8BXJ2 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Gm28760-201ENSMUST00000185995 736 ntBASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trerf1Q8BXJ2 Gm10686-201ENSMUST00000215389 3247 ntBASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Gm15240-201ENSMUST00000118156 720 ntBASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.05□□□□□ -0.16
Trerf1Q8BXJ2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms