Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ube3dQ8BX13 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ube3dQ8BX13 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ube3dQ8BX13 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ube3dQ8BX13 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ube3dQ8BX13 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ube3dQ8BX13 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.83□□□□□ -0.52
Ube3dQ8BX13 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ube3dQ8BX13 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Ube3dQ8BX13 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ube3dQ8BX13 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ube3dQ8BX13 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ube3dQ8BX13 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Mir7654-201ENSMUST00000185082 70 ntBASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Gm18187-201ENSMUST00000196476 984 ntBASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Gm18307-201ENSMUST00000206864 949 ntBASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.82□□□□□ -0.52
Ube3dQ8BX13 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Gm14716-201ENSMUST00000120138 718 ntBASIC11.81□□□□□ -0.52
Ube3dQ8BX13 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Gm24420-201ENSMUST00000176676 59 ntBASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Gm27701-201ENSMUST00000184498 110 ntBASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Gm25007-201ENSMUST00000083808 133 ntBASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Mir497b-201ENSMUST00000093601 125 ntBASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.81□□□□□ -0.52
Ube3dQ8BX13 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ube3dQ8BX13 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ube3dQ8BX13 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ube3dQ8BX13 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ube3dQ8BX13 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ube3dQ8BX13 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms