Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdk5rap1Q8BTW8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm1335-201ENSMUST00000121653 386 ntBASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm27682-201ENSMUST00000183930 110 ntBASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap1Q8BTW8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm13392-201ENSMUST00000117708 150 ntBASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm27514-201ENSMUST00000183692 110 ntBASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Gm10478-201ENSMUST00000084451 396 ntBASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap1Q8BTW8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap1Q8BTW8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms