Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Rnf38Q8BI21 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm4875-201ENSMUST00000118257 786 ntBASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm12403-201ENSMUST00000121384 959 ntBASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm9063-201ENSMUST00000223299 582 ntBASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf38Q8BI21 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf38Q8BI21 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf38Q8BI21 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf38Q8BI21 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf38Q8BI21 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf38Q8BI21 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.83□□□□□ -0.35
Rnf38Q8BI21 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Gm45841-201ENSMUST00000207700 164 ntBASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf38Q8BI21 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms