Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Gm5279-201ENSMUST00000199575 745 ntBASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Gm15823-201ENSMUST00000064305 670 ntBASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Samm50Q8BGH2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Gm12091-201ENSMUST00000146791 830 ntBASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Gm23984-201ENSMUST00000157139 203 ntBASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Gm5354-201ENSMUST00000182417 973 ntBASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Mir6392-201ENSMUST00000184924 108 ntBASIC15.57■□□□□ 0.08
Samm50Q8BGH2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Samm50Q8BGH2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Mir698-201ENSMUST00000102164 109 ntBASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Gm24420-201ENSMUST00000176676 59 ntBASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Gm8515-201ENSMUST00000194852 576 ntBASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Gm18018-201ENSMUST00000198273 408 ntBASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Gm18624-201ENSMUST00000220966 658 ntBASIC15.56■□□□□ 0.08
Samm50Q8BGH2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Samm50Q8BGH2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Samm50Q8BGH2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms