Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ctdp1Q7TSG2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ctdp1Q7TSG2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Gm38294-201ENSMUST00000192831 381 ntBASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Gm9063-201ENSMUST00000223299 582 ntBASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ctdp1Q7TSG2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms