Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 AC159106.1-201ENSMUST00000224421 690 ntBASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Cks1brtQ3UNC9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Gm11780-201ENSMUST00000136880 516 ntBASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Gm22240-201ENSMUST00000175225 82 ntBASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Gm3809-201ENSMUST00000180973 1006 ntBASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Cks1brtQ3UNC9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC9.48□□□□□ -0.89
Cks1brtQ3UNC9 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms