Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Gm15703-201ENSMUST00000120250 880 ntBASIC18.38■□□□□ 0.53
Trpm1Q2TV84 Gm14460-201ENSMUST00000121511 639 ntBASIC18.38■□□□□ 0.53
Trpm1Q2TV84 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm1Q2TV84 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trpm1Q2TV84 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trpm1Q2TV84 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm1Q2TV84 Gm1821-202ENSMUST00000227415 750 ntBASIC18.38■□□□□ 0.53
Trpm1Q2TV84 AC133602.1-201ENSMUST00000227510 509 ntBASIC18.38■□□□□ 0.53
Trpm1Q2TV84 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm1Q2TV84 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm1Q2TV84 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Ginm1-202ENSMUST00000065124 300 ntBASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Gm4782-201ENSMUST00000168705 2046 ntBASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Gm18626-201ENSMUST00000221512 1409 ntBASIC18.37■□□□□ 0.53
Trpm1Q2TV84 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Gm4482-201ENSMUST00000200876 742 ntBASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Gm9996-201ENSMUST00000070359 913 ntBASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm1Q2TV84 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Gm13888-201ENSMUST00000119148 422 ntBASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Gm13394-201ENSMUST00000121658 1000 ntBASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Gm15881-201ENSMUST00000148792 942 ntBASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Gm22138-201ENSMUST00000158748 128 ntBASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Gm12626-201ENSMUST00000117339 1983 ntBASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Gm12623-201ENSMUST00000119849 1983 ntBASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trpm1Q2TV84 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC18.34■□□□□ 0.53
Trpm1Q2TV84 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms