Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.11□□□□□ -0.31
Col9a1Q05722 Gm11637-201ENSMUST00000120601 592 ntBASIC13.11□□□□□ -0.31
Col9a1Q05722 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Col9a1Q05722 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.11□□□□□ -0.31
Col9a1Q05722 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Col9a1Q05722 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col9a1Q05722 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC13.11□□□□□ -0.31
Col9a1Q05722 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC13.11□□□□□ -0.31
Col9a1Q05722 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC13.11□□□□□ -0.31
Col9a1Q05722 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.11□□□□□ -0.31
Col9a1Q05722 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Col9a1Q05722 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.11□□□□□ -0.31
Col9a1Q05722 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.11□□□□□ -0.31
Col9a1Q05722 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col9a1Q05722 AC154424.1-201ENSMUST00000225883 799 ntBASIC13.11□□□□□ -0.31
Col9a1Q05722 AC129017.2-201ENSMUST00000226118 1284 ntBASIC13.11□□□□□ -0.31
Col9a1Q05722 AC140368.1-202ENSMUST00000226131 658 ntBASIC13.11□□□□□ -0.31
Col9a1Q05722 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col9a1Q05722 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Col9a1Q05722 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.11□□□□□ -0.31
Col9a1Q05722 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Col9a1Q05722 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a1Q05722 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col9a1Q05722 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.1□□□□□ -0.31
Col9a1Q05722 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col9a1Q05722 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.1□□□□□ -0.31
Col9a1Q05722 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Col9a1Q05722 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.1□□□□□ -0.31
Col9a1Q05722 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Col9a1Q05722 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.1□□□□□ -0.31
Col9a1Q05722 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC13.1□□□□□ -0.31
Col9a1Q05722 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Col9a1Q05722 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Gm9931-201ENSMUST00000193584 1185 ntBASIC13.1□□□□□ -0.31
Col9a1Q05722 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC13.1□□□□□ -0.31
Col9a1Q05722 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 AC132384.6-201ENSMUST00000218976 1206 ntBASIC13.1□□□□□ -0.31
Col9a1Q05722 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col9a1Q05722 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC13.1□□□□□ -0.31
Col9a1Q05722 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Col9a1Q05722 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.1□□□□□ -0.31
Col9a1Q05722 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Col9a1Q05722 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a1Q05722 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.1□□□□□ -0.31
Col9a1Q05722 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Col9a1Q05722 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a1Q05722 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a1Q05722 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col9a1Q05722 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a1Q05722 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a1Q05722 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.09□□□□□ -0.31
Col9a1Q05722 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a1Q05722 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Col9a1Q05722 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a1Q05722 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.09□□□□□ -0.31
Col9a1Q05722 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col9a1Q05722 Gm16044-201ENSMUST00000118475 450 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms