Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Nkx3-2P97503 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx3-2P97503 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.56□□□□□ -0.4
Nkx3-2P97503 Gm11425-201ENSMUST00000119608 498 ntBASIC12.56□□□□□ -0.4
Nkx3-2P97503 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.56□□□□□ -0.4
Nkx3-2P97503 Gm45784-201ENSMUST00000188360 142 ntBASIC12.56□□□□□ -0.4
Nkx3-2P97503 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Gm9396-201ENSMUST00000076703 567 ntBASIC12.56□□□□□ -0.4
Nkx3-2P97503 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.56□□□□□ -0.4
Nkx3-2P97503 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.56□□□□□ -0.4
Nkx3-2P97503 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nkx3-2P97503 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx3-2P97503 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx3-2P97503 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx3-2P97503 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Nkx3-2P97503 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx3-2P97503 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx3-2P97503 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx3-2P97503 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx3-2P97503 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.55□□□□□ -0.4
Nkx3-2P97503 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx3-2P97503 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.55□□□□□ -0.4
Nkx3-2P97503 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx3-2P97503 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx3-2P97503 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nkx3-2P97503 Gm10156-201ENSMUST00000122364 462 ntBASIC12.55□□□□□ -0.4
Nkx3-2P97503 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 134.5 ms