Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.44□□□□□ -0.1
Trim43cP86449 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Trim43cP86449 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim43cP86449 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Gm13612-201ENSMUST00000119276 390 ntBASIC14.44□□□□□ -0.1
Trim43cP86449 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim43cP86449 Gm6152-201ENSMUST00000151704 340 ntBASIC14.44□□□□□ -0.1
Trim43cP86449 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim43cP86449 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim43cP86449 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim43cP86449 Gm6745-201ENSMUST00000199216 526 ntBASIC14.44□□□□□ -0.1
Trim43cP86449 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.44□□□□□ -0.1
Trim43cP86449 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.44□□□□□ -0.1
Trim43cP86449 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim43cP86449 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.44□□□□□ -0.1
Trim43cP86449 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.44□□□□□ -0.1
Trim43cP86449 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.44□□□□□ -0.1
Trim43cP86449 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim43cP86449 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43cP86449 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Trim43cP86449 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.43□□□□□ -0.1
Trim43cP86449 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trim43cP86449 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim43cP86449 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Trim43cP86449 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Trim43cP86449 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim43cP86449 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim43cP86449 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim43cP86449 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim43cP86449 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trim43cP86449 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43cP86449 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim43cP86449 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.42□□□□□ -0.1
Trim43cP86449 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.42□□□□□ -0.1
Trim43cP86449 Gm12490-201ENSMUST00000120255 560 ntBASIC14.42□□□□□ -0.1
Trim43cP86449 Proscos-202ENSMUST00000178990 666 ntBASIC14.42□□□□□ -0.1
Trim43cP86449 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.42□□□□□ -0.1
Trim43cP86449 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim43cP86449 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim43cP86449 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43cP86449 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms