Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.85□□□□□ -0.51
SgcbP82349 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.85□□□□□ -0.51
SgcbP82349 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.85□□□□□ -0.51
SgcbP82349 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SgcbP82349 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SgcbP82349 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SgcbP82349 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SgcbP82349 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
SgcbP82349 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
SgcbP82349 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SgcbP82349 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SgcbP82349 Gm15824-201ENSMUST00000119516 955 ntBASIC11.84□□□□□ -0.51
SgcbP82349 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.84□□□□□ -0.51
SgcbP82349 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.84□□□□□ -0.51
SgcbP82349 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SgcbP82349 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.84□□□□□ -0.51
SgcbP82349 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SgcbP82349 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.84□□□□□ -0.51
SgcbP82349 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.84□□□□□ -0.51
SgcbP82349 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.84□□□□□ -0.51
SgcbP82349 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
SgcbP82349 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Gm16372-201ENSMUST00000073088 450 ntBASIC11.84□□□□□ -0.51
SgcbP82349 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SgcbP82349 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.84□□□□□ -0.51
SgcbP82349 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
SgcbP82349 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SgcbP82349 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
SgcbP82349 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.83□□□□□ -0.52
SgcbP82349 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.83□□□□□ -0.52
SgcbP82349 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SgcbP82349 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SgcbP82349 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.83□□□□□ -0.52
SgcbP82349 Gm13612-201ENSMUST00000119276 390 ntBASIC11.83□□□□□ -0.52
SgcbP82349 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.83□□□□□ -0.52
SgcbP82349 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.83□□□□□ -0.52
SgcbP82349 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.83□□□□□ -0.52
SgcbP82349 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
SgcbP82349 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.83□□□□□ -0.52
SgcbP82349 Gm5035-201ENSMUST00000215581 927 ntBASIC11.83□□□□□ -0.52
SgcbP82349 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SgcbP82349 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcbP82349 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SgcbP82349 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms