Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.06□□□□□ -0.48
Lsm3P62311 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.06□□□□□ -0.48
Lsm3P62311 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.06□□□□□ -0.48
Lsm3P62311 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.06□□□□□ -0.48
Lsm3P62311 AV026068-213ENSMUST00000223675 1171 ntBASIC12.06□□□□□ -0.48
Lsm3P62311 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Lsm3P62311 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lsm3P62311 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lsm3P62311 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lsm3P62311 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm3P62311 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lsm3P62311 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm3P62311 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm3P62311 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.05□□□□□ -0.48
Lsm3P62311 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.05□□□□□ -0.48
Lsm3P62311 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm3P62311 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm3P62311 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.05□□□□□ -0.48
Lsm3P62311 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.05□□□□□ -0.48
Lsm3P62311 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm3P62311 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm3P62311 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Lsm3P62311 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Lsm3P62311 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Lsm3P62311 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm3P62311 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.05□□□□□ -0.48
Lsm3P62311 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm3P62311 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Lsm3P62311 Gm13036-201ENSMUST00000117799 748 ntBASIC12.04□□□□□ -0.48
Lsm3P62311 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm3P62311 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Lsm3P62311 Gm5177-201ENSMUST00000183092 997 ntBASIC12.04□□□□□ -0.48
Lsm3P62311 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
Lsm3P62311 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.04□□□□□ -0.48
Lsm3P62311 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Gm33142-201ENSMUST00000193913 867 ntBASIC12.04□□□□□ -0.48
Lsm3P62311 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm3P62311 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Lsm3P62311 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.04□□□□□ -0.48
Lsm3P62311 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Mir497b-201ENSMUST00000093601 125 ntBASIC12.04□□□□□ -0.48
Lsm3P62311 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.04□□□□□ -0.48
Lsm3P62311 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm3P62311 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms