Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.02□□□□□ -0.49
Vbp1P61759 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vbp1P61759 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.01□□□□□ -0.49
Vbp1P61759 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Vbp1P61759 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.01□□□□□ -0.49
Vbp1P61759 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Vbp1P61759 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.01□□□□□ -0.49
Vbp1P61759 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vbp1P61759 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.01□□□□□ -0.49
Vbp1P61759 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.01□□□□□ -0.49
Vbp1P61759 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.01□□□□□ -0.49
Vbp1P61759 Gm6376-201ENSMUST00000209407 580 ntBASIC12.01□□□□□ -0.49
Vbp1P61759 AV026068-213ENSMUST00000223675 1171 ntBASIC12.01□□□□□ -0.49
Vbp1P61759 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.01□□□□□ -0.49
Vbp1P61759 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vbp1P61759 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.01□□□□□ -0.49
Vbp1P61759 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vbp1P61759 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.01□□□□□ -0.49
Vbp1P61759 BC001981-202ENSMUST00000191393 1545 ntBASIC12.01□□□□□ -0.49
Vbp1P61759 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vbp1P61759 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12□□□□□ -0.49
Vbp1P61759 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vbp1P61759 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vbp1P61759 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Vbp1P61759 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vbp1P61759 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vbp1P61759 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12□□□□□ -0.49
Vbp1P61759 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Vbp1P61759 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12□□□□□ -0.49
Vbp1P61759 Gm5177-201ENSMUST00000183092 997 ntBASIC12□□□□□ -0.49
Vbp1P61759 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12□□□□□ -0.49
Vbp1P61759 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12□□□□□ -0.49
Vbp1P61759 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12□□□□□ -0.49
Vbp1P61759 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12□□□□□ -0.49
Vbp1P61759 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Vbp1P61759 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12□□□□□ -0.49
Vbp1P61759 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12□□□□□ -0.49
Vbp1P61759 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12□□□□□ -0.49
Vbp1P61759 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vbp1P61759 Mir497b-201ENSMUST00000093601 125 ntBASIC12□□□□□ -0.49
Vbp1P61759 Gm45266-201ENSMUST00000210111 2173 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms