Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.28□□□□□ -0.28
Fdft1P53798 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Fdft1P53798 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.28□□□□□ -0.28
Fdft1P53798 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.28□□□□□ -0.28
Fdft1P53798 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Fdft1P53798 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Fdft1P53798 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.28□□□□□ -0.28
Fdft1P53798 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.28□□□□□ -0.28
Fdft1P53798 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Fdft1P53798 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.28□□□□□ -0.28
Fdft1P53798 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Fdft1P53798 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fdft1P53798 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fdft1P53798 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Fdft1P53798 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Fdft1P53798 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fdft1P53798 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Fdft1P53798 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Fdft1P53798 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fdft1P53798 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Fdft1P53798 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Fdft1P53798 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fdft1P53798 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Fdft1P53798 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Fdft1P53798 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.27□□□□□ -0.29
Fdft1P53798 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.27□□□□□ -0.29
Fdft1P53798 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Fdft1P53798 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.27□□□□□ -0.29
Fdft1P53798 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Gm16215-201ENSMUST00000161990 637 ntBASIC13.27□□□□□ -0.29
Fdft1P53798 Gm5279-201ENSMUST00000199575 745 ntBASIC13.27□□□□□ -0.29
Fdft1P53798 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.27□□□□□ -0.29
Fdft1P53798 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Fdft1P53798 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Fdft1P53798 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.27□□□□□ -0.29
Fdft1P53798 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Fdft1P53798 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Fdft1P53798 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Fdft1P53798 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Fdft1P53798 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Fdft1P53798 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fdft1P53798 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.26□□□□□ -0.29
Fdft1P53798 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Gm12485-201ENSMUST00000119641 291 ntBASIC13.26□□□□□ -0.29
Fdft1P53798 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.26□□□□□ -0.29
Fdft1P53798 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.26□□□□□ -0.29
Fdft1P53798 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Fdft1P53798 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Fdft1P53798 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Fdft1P53798 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Fdft1P53798 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.26□□□□□ -0.29
Fdft1P53798 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.26□□□□□ -0.29
Fdft1P53798 Gm43094-201ENSMUST00000196549 921 ntBASIC13.26□□□□□ -0.29
Fdft1P53798 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Fdft1P53798 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.26□□□□□ -0.29
Fdft1P53798 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Fdft1P53798 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.26□□□□□ -0.29
Fdft1P53798 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.26□□□□□ -0.29
Fdft1P53798 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Fdft1P53798 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Fdft1P53798 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms