Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TfamP40630 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.87□□□□□ -0.35
TfamP40630 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.87□□□□□ -0.35
TfamP40630 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TfamP40630 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
TfamP40630 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
TfamP40630 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TfamP40630 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.87□□□□□ -0.35
TfamP40630 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.87□□□□□ -0.35
TfamP40630 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.87□□□□□ -0.35
TfamP40630 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
TfamP40630 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.87□□□□□ -0.35
TfamP40630 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.87□□□□□ -0.35
TfamP40630 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.87□□□□□ -0.35
TfamP40630 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TfamP40630 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.87□□□□□ -0.35
TfamP40630 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.87□□□□□ -0.35
TfamP40630 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.87□□□□□ -0.35
TfamP40630 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
TfamP40630 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.87□□□□□ -0.35
TfamP40630 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.87□□□□□ -0.35
TfamP40630 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TfamP40630 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.86□□□□□ -0.35
TfamP40630 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Syt7-205ENSMUST00000224135 1557 ntBASIC12.86□□□□□ -0.35
TfamP40630 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.86□□□□□ -0.35
TfamP40630 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
TfamP40630 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TfamP40630 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.86□□□□□ -0.35
TfamP40630 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.86□□□□□ -0.35
TfamP40630 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.86□□□□□ -0.35
TfamP40630 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.86□□□□□ -0.35
TfamP40630 Gm12403-201ENSMUST00000121384 959 ntBASIC12.86□□□□□ -0.35
TfamP40630 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Gm21854-201ENSMUST00000179901 471 ntBASIC12.86□□□□□ -0.35
TfamP40630 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.86□□□□□ -0.35
TfamP40630 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.86□□□□□ -0.35
TfamP40630 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.86□□□□□ -0.35
TfamP40630 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.86□□□□□ -0.35
TfamP40630 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.86□□□□□ -0.35
TfamP40630 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.86□□□□□ -0.35
TfamP40630 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.86□□□□□ -0.35
TfamP40630 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.86□□□□□ -0.35
TfamP40630 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Gm20445-201ENSMUST00000061905 565 ntBASIC12.86□□□□□ -0.35
TfamP40630 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.86□□□□□ -0.35
TfamP40630 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Gm24447-201ENSMUST00000083977 338 ntBASIC12.86□□□□□ -0.35
TfamP40630 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TfamP40630 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.86□□□□□ -0.35
TfamP40630 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TfamP40630 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TfamP40630 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms