Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.61□□□□□ -0.23
Mmp13P33435 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Mmp13P33435 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Mmp13P33435 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.61□□□□□ -0.23
Mmp13P33435 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Mmp13P33435 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.61□□□□□ -0.23
Mmp13P33435 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mmp13P33435 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Mmp13P33435 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Mmp13P33435 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mmp13P33435 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.6□□□□□ -0.23
Mmp13P33435 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.6□□□□□ -0.23
Mmp13P33435 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.6□□□□□ -0.23
Mmp13P33435 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.6□□□□□ -0.23
Mmp13P33435 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Gm12859-201ENSMUST00000117834 427 ntBASIC13.6□□□□□ -0.23
Mmp13P33435 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.6□□□□□ -0.23
Mmp13P33435 Gm21854-201ENSMUST00000179901 471 ntBASIC13.6□□□□□ -0.23
Mmp13P33435 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.6□□□□□ -0.23
Mmp13P33435 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Mmp13P33435 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Mmp13P33435 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.6□□□□□ -0.23
Mmp13P33435 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.6□□□□□ -0.23
Mmp13P33435 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.6□□□□□ -0.23
Mmp13P33435 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mmp13P33435 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Mmp13P33435 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.59□□□□□ -0.23
Mmp13P33435 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Gm6912-201ENSMUST00000117218 544 ntBASIC13.59□□□□□ -0.23
Mmp13P33435 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.59□□□□□ -0.23
Mmp13P33435 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.59□□□□□ -0.23
Mmp13P33435 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Mmp13P33435 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Mmp13P33435 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.59□□□□□ -0.23
Mmp13P33435 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Mmp13P33435 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Mmp13P33435 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Mmp13P33435 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp13P33435 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Mmp13P33435 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Mmp13P33435 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Mmp13P33435 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mmp13P33435 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Mmp13P33435 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Mmp13P33435 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mmp13P33435 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp13P33435 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.58□□□□□ -0.24
Mmp13P33435 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms