Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Cd40lgP27548 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.28□□□□□ -0.44
Cd40lgP27548 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.28□□□□□ -0.44
Cd40lgP27548 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cd40lgP27548 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.28□□□□□ -0.44
Cd40lgP27548 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.28□□□□□ -0.44
Cd40lgP27548 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Gm6180-201ENSMUST00000065243 498 ntBASIC12.28□□□□□ -0.44
Cd40lgP27548 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.28□□□□□ -0.44
Cd40lgP27548 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.28□□□□□ -0.44
Cd40lgP27548 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cd40lgP27548 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cd40lgP27548 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Cd40lgP27548 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cd40lgP27548 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cd40lgP27548 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.27□□□□□ -0.44
Cd40lgP27548 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.27□□□□□ -0.44
Cd40lgP27548 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Cd40lgP27548 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cd40lgP27548 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cd40lgP27548 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cd40lgP27548 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cd40lgP27548 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cd40lgP27548 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cd40lgP27548 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.27□□□□□ -0.45
Cd40lgP27548 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cd40lgP27548 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.27□□□□□ -0.45
Cd40lgP27548 Gm12490-201ENSMUST00000120255 560 ntBASIC12.27□□□□□ -0.45
Cd40lgP27548 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.27□□□□□ -0.45
Cd40lgP27548 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.27□□□□□ -0.45
Cd40lgP27548 Gm19078-201ENSMUST00000206311 727 ntBASIC12.27□□□□□ -0.45
Cd40lgP27548 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.27□□□□□ -0.45
Cd40lgP27548 Gm9908-201ENSMUST00000211534 448 ntBASIC12.27□□□□□ -0.45
Cd40lgP27548 Gm5186-201ENSMUST00000218781 920 ntBASIC12.27□□□□□ -0.45
Cd40lgP27548 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.27□□□□□ -0.45
Cd40lgP27548 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cd40lgP27548 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cd40lgP27548 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.27□□□□□ -0.45
Cd40lgP27548 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.27□□□□□ -0.45
Cd40lgP27548 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cd40lgP27548 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cd40lgP27548 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Cd40lgP27548 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cd40lgP27548 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Cd40lgP27548 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cd40lgP27548 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.26□□□□□ -0.45
Cd40lgP27548 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.26□□□□□ -0.45
Cd40lgP27548 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.26□□□□□ -0.45
Cd40lgP27548 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.26□□□□□ -0.45
Cd40lgP27548 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cd40lgP27548 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.26□□□□□ -0.45
Cd40lgP27548 Gm45384-201ENSMUST00000210451 277 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms