Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.53□□□□□ -0.4
TP20293 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.53□□□□□ -0.4
TP20293 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
TP20293 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TP20293 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
TP20293 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
TP20293 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TP20293 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TP20293 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TP20293 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TP20293 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.52□□□□□ -0.4
TP20293 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TP20293 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TP20293 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TP20293 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TP20293 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TP20293 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.52□□□□□ -0.41
TP20293 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.52□□□□□ -0.41
TP20293 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.52□□□□□ -0.41
TP20293 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TP20293 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TP20293 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TP20293 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.52□□□□□ -0.41
TP20293 Gm37917-201ENSMUST00000194711 392 ntBASIC12.52□□□□□ -0.41
TP20293 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TP20293 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.52□□□□□ -0.41
TP20293 Gm5161-201ENSMUST00000075243 853 ntBASIC12.52□□□□□ -0.41
TP20293 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.52□□□□□ -0.41
TP20293 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
TP20293 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.52□□□□□ -0.41
TP20293 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TP20293 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.52□□□□□ -0.41
TP20293 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TP20293 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.52□□□□□ -0.41
TP20293 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
TP20293 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.52□□□□□ -0.41
TP20293 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TP20293 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
TP20293 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
TP20293 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TP20293 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TP20293 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.51□□□□□ -0.41
TP20293 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
TP20293 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.51□□□□□ -0.41
TP20293 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
TP20293 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TP20293 Gm12485-201ENSMUST00000119641 291 ntBASIC12.51□□□□□ -0.41
TP20293 Gm15376-201ENSMUST00000122258 783 ntBASIC12.51□□□□□ -0.41
TP20293 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.51□□□□□ -0.41
TP20293 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.51□□□□□ -0.41
TP20293 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Gm18624-201ENSMUST00000220966 658 ntBASIC12.51□□□□□ -0.41
TP20293 Gm17330-201ENSMUST00000221047 165 ntBASIC12.51□□□□□ -0.41
TP20293 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Gm15823-201ENSMUST00000064305 670 ntBASIC12.51□□□□□ -0.41
TP20293 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.51□□□□□ -0.41
TP20293 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.51□□□□□ -0.41
TP20293 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.51□□□□□ -0.41
TP20293 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
TP20293 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.51□□□□□ -0.41
TP20293 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TP20293 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TP20293 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TP20293 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
TP20293 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TP20293 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
TP20293 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TP20293 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TP20293 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TP20293 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TP20293 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms