Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Srp54P14576 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 Gm12203-201ENSMUST00000118235 598 ntBASIC13.07□□□□□ -0.32
Srp54P14576 Gm12209-201ENSMUST00000120089 596 ntBASIC13.07□□□□□ -0.32
Srp54P14576 Gm16177-201ENSMUST00000120728 718 ntBASIC13.07□□□□□ -0.32
Srp54P14576 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.07□□□□□ -0.32
Srp54P14576 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.07□□□□□ -0.32
Srp54P14576 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.07□□□□□ -0.32
Srp54P14576 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.07□□□□□ -0.32
Srp54P14576 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Srp54P14576 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.07□□□□□ -0.32
Srp54P14576 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.07□□□□□ -0.32
Srp54P14576 Gm29705-201ENSMUST00000212598 474 ntBASIC13.07□□□□□ -0.32
Srp54P14576 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Srp54P14576 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Srp54P14576 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.07□□□□□ -0.32
Srp54P14576 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Srp54P14576 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Srp54P14576 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Srp54P14576 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Srp54P14576 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.06□□□□□ -0.32
Srp54P14576 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Srp54P14576 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.06□□□□□ -0.32
Srp54P14576 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.06□□□□□ -0.32
Srp54P14576 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Srp54P14576 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Srp54P14576 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Srp54P14576 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.06□□□□□ -0.32
Srp54P14576 Gm37424-201ENSMUST00000191727 561 ntBASIC13.06□□□□□ -0.32
Srp54P14576 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.06□□□□□ -0.32
Srp54P14576 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.06□□□□□ -0.32
Srp54P14576 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.06□□□□□ -0.32
Srp54P14576 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.06□□□□□ -0.32
Srp54P14576 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.06□□□□□ -0.32
Srp54P14576 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.06□□□□□ -0.32
Srp54P14576 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.06□□□□□ -0.32
Srp54P14576 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srp54P14576 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Srp54P14576 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.05□□□□□ -0.32
Srp54P14576 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Srp54P14576 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.05□□□□□ -0.32
Srp54P14576 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Srp54P14576 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Srp54P14576 Gm8062-201ENSMUST00000139696 444 ntBASIC13.05□□□□□ -0.32
Srp54P14576 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.05□□□□□ -0.32
Srp54P14576 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.05□□□□□ -0.32
Srp54P14576 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.05□□□□□ -0.32
Srp54P14576 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.05□□□□□ -0.32
Srp54P14576 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Srp54P14576 Gm16372-201ENSMUST00000073088 450 ntBASIC13.05□□□□□ -0.32
Srp54P14576 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms