Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm18055-201ENSMUST00000208254 547 ntBASIC11.84□□□□□ -0.51
P06344 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
P06344 Gm7561-201ENSMUST00000211203 886 ntBASIC11.84□□□□□ -0.51
P06344 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.84□□□□□ -0.51
P06344 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.84□□□□□ -0.51
P06344 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
P06344 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Gm10012-201ENSMUST00000078252 192 ntBASIC11.84□□□□□ -0.51
P06344 Gm6091-201ENSMUST00000098307 165 ntBASIC11.84□□□□□ -0.51
P06344 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.84□□□□□ -0.51
P06344 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06344 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P06344 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P06344 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P06344 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
P06344 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P06344 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P06344 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.83□□□□□ -0.52
P06344 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.83□□□□□ -0.52
P06344 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P06344 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
P06344 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
P06344 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
P06344 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P06344 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
P06344 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.83□□□□□ -0.52
P06344 Gm11803-201ENSMUST00000119966 444 ntBASIC11.83□□□□□ -0.52
P06344 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.83□□□□□ -0.52
P06344 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.83□□□□□ -0.52
P06344 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.83□□□□□ -0.52
P06344 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.83□□□□□ -0.52
P06344 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.83□□□□□ -0.52
P06344 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.83□□□□□ -0.52
P06344 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.83□□□□□ -0.52
P06344 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P06344 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
P06344 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
P06344 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.83□□□□□ -0.52
P06344 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
P06344 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06344 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
P06344 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
P06344 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.82□□□□□ -0.52
P06344 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
P06344 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06344 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms