Protein–RNA interactions for Protein: P01896

H-2 class I histocompatibility antigen, alpha chain (Fragment), mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01896 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P01896 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
P01896 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01896 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
P01896 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC9.65□□□□□ -0.87
P01896 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
P01896 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
P01896 Gm9924-202ENSMUST00000192760 2311 ntBASIC9.65□□□□□ -0.87
P01896 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
P01896 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.65□□□□□ -0.87
P01896 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
P01896 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
P01896 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
P01896 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC9.64□□□□□ -0.87
P01896 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.64□□□□□ -0.87
P01896 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
P01896 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
P01896 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.64□□□□□ -0.87
P01896 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC9.64□□□□□ -0.87
P01896 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
P01896 Gm17271-201ENSMUST00000165535 355 ntBASIC9.64□□□□□ -0.87
P01896 Gm27741-201ENSMUST00000185060 237 ntBASIC9.64□□□□□ -0.87
P01896 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC9.64□□□□□ -0.87
P01896 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 AC174742.1-201ENSMUST00000218272 304 ntBASIC9.64□□□□□ -0.87
P01896 Psmb5-202ENSMUST00000227257 622 ntBASIC9.64□□□□□ -0.87
P01896 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
P01896 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
P01896 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
P01896 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
P01896 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
P01896 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
P01896 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC9.64□□□□□ -0.87
P01896 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P01896 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC9.64□□□□□ -0.87
P01896 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
P01896 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
P01896 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
P01896 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
P01896 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC9.63□□□□□ -0.87
P01896 Gm11543-201ENSMUST00000120758 370 ntBASIC9.63□□□□□ -0.87
P01896 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC9.63□□□□□ -0.87
P01896 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC9.63□□□□□ -0.87
P01896 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Gm7229-201ENSMUST00000214719 1007 ntBASIC9.63□□□□□ -0.87
P01896 AC154572.2-201ENSMUST00000225105 997 ntBASIC9.63□□□□□ -0.87
P01896 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
P01896 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
P01896 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
P01896 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P01896 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms