Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.13□□□□□ -0.31
Pdlim1O70400 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.13□□□□□ -0.31
Pdlim1O70400 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.13□□□□□ -0.31
Pdlim1O70400 Gm14350-201ENSMUST00000116642 640 ntBASIC13.13□□□□□ -0.31
Pdlim1O70400 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.13□□□□□ -0.31
Pdlim1O70400 Gm10156-201ENSMUST00000122364 462 ntBASIC13.13□□□□□ -0.31
Pdlim1O70400 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.13□□□□□ -0.31
Pdlim1O70400 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.13□□□□□ -0.31
Pdlim1O70400 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.13□□□□□ -0.31
Pdlim1O70400 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.13□□□□□ -0.31
Pdlim1O70400 Gm44069-201ENSMUST00000204898 506 ntBASIC13.13□□□□□ -0.31
Pdlim1O70400 Gm5035-201ENSMUST00000215581 927 ntBASIC13.13□□□□□ -0.31
Pdlim1O70400 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.13□□□□□ -0.31
Pdlim1O70400 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.13□□□□□ -0.31
Pdlim1O70400 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.13□□□□□ -0.31
Pdlim1O70400 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.13□□□□□ -0.31
Pdlim1O70400 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pdlim1O70400 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim1O70400 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Pdlim1O70400 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pdlim1O70400 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pdlim1O70400 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.12□□□□□ -0.31
Pdlim1O70400 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.12□□□□□ -0.31
Pdlim1O70400 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.12□□□□□ -0.31
Pdlim1O70400 Gm18041-201ENSMUST00000218210 618 ntBASIC13.12□□□□□ -0.31
Pdlim1O70400 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pdlim1O70400 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Pdlim1O70400 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pdlim1O70400 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Pdlim1O70400 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim1O70400 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pdlim1O70400 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pdlim1O70400 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Pdlim1O70400 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.11□□□□□ -0.31
Pdlim1O70400 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pdlim1O70400 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Gm16202-201ENSMUST00000117532 544 ntBASIC13.11□□□□□ -0.31
Pdlim1O70400 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.11□□□□□ -0.31
Pdlim1O70400 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Pdlim1O70400 Gm24196-201ENSMUST00000179161 110 ntBASIC13.11□□□□□ -0.31
Pdlim1O70400 Gm5745-201ENSMUST00000183748 313 ntBASIC13.11□□□□□ -0.31
Pdlim1O70400 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Gm19931-201ENSMUST00000198920 368 ntBASIC13.11□□□□□ -0.31
Pdlim1O70400 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Pdlim1O70400 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.11□□□□□ -0.31
Pdlim1O70400 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim1O70400 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pdlim1O70400 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms