Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm37935-201ENSMUST00000192012 982 ntBASIC15.8■□□□□ 0.12
Smarce1O54941 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.8■□□□□ 0.12
Smarce1O54941 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.8■□□□□ 0.12
Smarce1O54941 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.8■□□□□ 0.12
Smarce1O54941 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.8■□□□□ 0.12
Smarce1O54941 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smarce1O54941 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Smarce1O54941 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smarce1O54941 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarce1O54941 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.79■□□□□ 0.12
Smarce1O54941 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Smarce1O54941 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Gm13223-201ENSMUST00000118609 747 ntBASIC15.79■□□□□ 0.12
Smarce1O54941 Gm12485-201ENSMUST00000119641 291 ntBASIC15.79■□□□□ 0.12
Smarce1O54941 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
Smarce1O54941 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.79■□□□□ 0.12
Smarce1O54941 Gm19931-201ENSMUST00000198920 368 ntBASIC15.79■□□□□ 0.12
Smarce1O54941 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarce1O54941 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarce1O54941 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Smarce1O54941 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarce1O54941 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.79■□□□□ 0.12
Smarce1O54941 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarce1O54941 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarce1O54941 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Smarce1O54941 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarce1O54941 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Smarce1O54941 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.78■□□□□ 0.12
Smarce1O54941 Gm13616-201ENSMUST00000120600 222 ntBASIC15.78■□□□□ 0.12
Smarce1O54941 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Smarce1O54941 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.78■□□□□ 0.12
Smarce1O54941 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.78■□□□□ 0.12
Smarce1O54941 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Smarce1O54941 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Smarce1O54941 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Smarce1O54941 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarce1O54941 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarce1O54941 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarce1O54941 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarce1O54941 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarce1O54941 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarce1O54941 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Smarce1O54941 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarce1O54941 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarce1O54941 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarce1O54941 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Smarce1O54941 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarce1O54941 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarce1O54941 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarce1O54941 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Smarce1O54941 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarce1O54941 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms