Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Itgb3O54890 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Itgb3O54890 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Itgb3O54890 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Itgb3O54890 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.07□□□□□ -0.16
Itgb3O54890 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.07□□□□□ -0.16
Itgb3O54890 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Itgb3O54890 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Itgb3O54890 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Itgb3O54890 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Itgb3O54890 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Itgb3O54890 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Itgb3O54890 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.06□□□□□ -0.16
Itgb3O54890 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.06□□□□□ -0.16
Itgb3O54890 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.06□□□□□ -0.16
Itgb3O54890 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Itgb3O54890 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.06□□□□□ -0.16
Itgb3O54890 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.06□□□□□ -0.16
Itgb3O54890 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Itgb3O54890 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.06□□□□□ -0.16
Itgb3O54890 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.06□□□□□ -0.16
Itgb3O54890 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Itgb3O54890 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Itgb3O54890 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.06□□□□□ -0.16
Itgb3O54890 Gm45841-201ENSMUST00000207700 164 ntBASIC14.06□□□□□ -0.16
Itgb3O54890 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.06□□□□□ -0.16
Itgb3O54890 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.06□□□□□ -0.16
Itgb3O54890 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Itgb3O54890 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.06□□□□□ -0.16
Itgb3O54890 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Itgb3O54890 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Itgb3O54890 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.06□□□□□ -0.16
Itgb3O54890 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.06□□□□□ -0.16
Itgb3O54890 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.06□□□□□ -0.16
Itgb3O54890 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.06□□□□□ -0.16
Itgb3O54890 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Itgb3O54890 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Matn2-206ENSMUST00000228570 2798 ntBASIC14.05□□□□□ -0.16
Itgb3O54890 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Itgb3O54890 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.05□□□□□ -0.16
Itgb3O54890 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Itgb3O54890 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.05□□□□□ -0.16
Itgb3O54890 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.05□□□□□ -0.16
Itgb3O54890 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.05□□□□□ -0.16
Itgb3O54890 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Gm10146-201ENSMUST00000072739 309 ntBASIC14.05□□□□□ -0.16
Itgb3O54890 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.05□□□□□ -0.16
Itgb3O54890 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.05□□□□□ -0.16
Itgb3O54890 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Itgb3O54890 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Itgb3O54890 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.05□□□□□ -0.16
Itgb3O54890 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Itgb3O54890 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Itgb3O54890 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.04□□□□□ -0.16
Itgb3O54890 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Itgb3O54890 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.04□□□□□ -0.16
Itgb3O54890 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms