Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim55G3X8Y1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.61□□□□□ -0.23
Trim55G3X8Y1 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.6□□□□□ -0.23
Trim55G3X8Y1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim55G3X8Y1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms