Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Colca2F8VPY8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Colca2F8VPY8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Colca2F8VPY8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Colca2F8VPY8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Colca2F8VPY8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Colca2F8VPY8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Colca2F8VPY8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Colca2F8VPY8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.45□□□□□ -0.42
Colca2F8VPY8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Gm7848-201ENSMUST00000210739 718 ntBASIC12.45□□□□□ -0.42
Colca2F8VPY8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.45□□□□□ -0.42
Colca2F8VPY8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Spcs1-203ENSMUST00000226374 592 ntBASIC12.45□□□□□ -0.42
Colca2F8VPY8 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Colca2F8VPY8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Gm12015-201ENSMUST00000117065 843 ntBASIC12.44□□□□□ -0.42
Colca2F8VPY8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Gm6963-201ENSMUST00000147879 379 ntBASIC12.44□□□□□ -0.42
Colca2F8VPY8 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Gm18734-201ENSMUST00000172937 808 ntBASIC12.44□□□□□ -0.42
Colca2F8VPY8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Gm5051-201ENSMUST00000204085 485 ntBASIC12.44□□□□□ -0.42
Colca2F8VPY8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Colca2F8VPY8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Colca2F8VPY8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Colca2F8VPY8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Colca2F8VPY8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Colca2F8VPY8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Colca2F8VPY8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Colca2F8VPY8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Colca2F8VPY8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Colca2F8VPY8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.43□□□□□ -0.42
Colca2F8VPY8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms