Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Slc22a28B2RT89 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Gm23935-201ENSMUST00000102303 57 ntBASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Gm24270-201ENSMUST00000102326 57 ntBASIC12.25□□□□□ -0.45
Slc22a28B2RT89 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Gm13223-201ENSMUST00000118609 747 ntBASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Gm24245-201ENSMUST00000157318 57 ntBASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Slc22a28B2RT89 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.24□□□□□ -0.45
Slc22a28B2RT89 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Slc22a28B2RT89 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms