Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gm14028-201ENSMUST00000117434 479 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 AU022133-201ENSMUST00000200601 873 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gm8959-201ENSMUST00000213150 571 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gm24830-201ENSMUST00000102024 166 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gm25890-201ENSMUST00000177643 165 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gm22614-201ENSMUST00000178300 165 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gm22042-201ENSMUST00000082989 165 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gm26232-201ENSMUST00000083360 166 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gm24136-201ENSMUST00000083374 165 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Gm26110-201ENSMUST00000083971 165 ntBASIC11.19□□□□□ -0.62
Col6a4A2AX52 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col6a4A2AX52 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Gm13316-201ENSMUST00000140537 691 ntBASIC11.18□□□□□ -0.62
Col6a4A2AX52 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Col6a4A2AX52 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms