Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Mir6392-201ENSMUST00000184924 108 ntBASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Gm37917-201ENSMUST00000194711 392 ntBASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Gm18624-201ENSMUST00000220966 658 ntBASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Gm26315-201ENSMUST00000083890 321 ntBASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
H2afb2S4R1M3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Gm5866-201ENSMUST00000177881 973 ntBASIC13.29□□□□□ -0.28
H2afb2S4R1M3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Mir7654-201ENSMUST00000185082 70 ntBASIC13.29□□□□□ -0.28
H2afb2S4R1M3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.29□□□□□ -0.28
H2afb2S4R1M3 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
H2afb2S4R1M3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb2S4R1M3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms