Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp2aQ9DB34 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Chmp2aQ9DB34 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Gm12928-201ENSMUST00000117115 573 ntBASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Gm2495-201ENSMUST00000191160 466 ntBASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp2aQ9DB34 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Gm11478-201ENSMUST00000117851 599 ntBASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp2aQ9DB34 Gm38144-201ENSMUST00000192790 465 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms