Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Gm15240-201ENSMUST00000118156 720 ntBASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Gm2423-201ENSMUST00000074863 733 ntBASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Rubie-203ENSMUST00000227803 2430 ntBASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt2Q9CZN7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Gm27772-201ENSMUST00000184900 187 ntBASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Gm44719-201ENSMUST00000206404 149 ntBASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Gm6218-201ENSMUST00000219812 628 ntBASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Gm19220-201ENSMUST00000222682 803 ntBASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Shmt2Q9CZN7 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.71□□□□□ -0.38
Shmt2Q9CZN7 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.71□□□□□ -0.38
Shmt2Q9CZN7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shmt2Q9CZN7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shmt2Q9CZN7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Gm42612-201ENSMUST00000197986 623 ntBASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Gm43170-201ENSMUST00000199827 612 ntBASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.7□□□□□ -0.38
Shmt2Q9CZN7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms