Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Cts7-204ENSMUST00000225321 1257 ntBASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Prpf8Q99PV0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gm10146-201ENSMUST00000072739 309 ntBASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gm13369-201ENSMUST00000119442 987 ntBASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Prpf8Q99PV0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Gm19309-201ENSMUST00000218295 205 ntBASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prpf8Q99PV0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms