Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gtf2ird2Q99NI3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Gm14127-201ENSMUST00000117906 678 ntBASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Gm27847-201ENSMUST00000183711 107 ntBASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Gm27375-201ENSMUST00000183799 107 ntBASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gtf2ird2Q99NI3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Gm8598-201ENSMUST00000221184 836 ntBASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gtf2ird2Q99NI3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gtf2ird2Q99NI3 Gm12390-201ENSMUST00000117897 397 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms