Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Auts2-212ENSMUST00000178555 309 ntBASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Mir7221-201ENSMUST00000184009 72 ntBASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Gm19220-201ENSMUST00000222682 803 ntBASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb13Q91Y06 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Gm42550-201ENSMUST00000201553 960 ntBASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Pcdhb13Q91Y06 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Gm28631-201ENSMUST00000190740 334 ntBASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb13Q91Y06 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms