Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Gm18624-201ENSMUST00000220966 658 ntBASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.27□□□□□ -0.28
Pcdhb20Q91XZ9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb20Q91XZ9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb20Q91XZ9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb20Q91XZ9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb20Q91XZ9 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC13.27□□□□□ -0.28
Pcdhb20Q91XZ9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhb20Q91XZ9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb20Q91XZ9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Mir669p-2-201ENSMUST00000103868 87 ntBASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Mir669p-1-201ENSMUST00000103884 87 ntBASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Gm45845-201ENSMUST00000207326 582 ntBASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Gm45636-201ENSMUST00000210497 1064 ntBASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 AC131068.3-201ENSMUST00000228438 1456 ntBASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.27□□□□□ -0.29
Pcdhb20Q91XZ9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Gm26595-201ENSMUST00000181585 484 ntBASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Gm5066-201ENSMUST00000188479 822 ntBASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms