Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Gm17795-201ENSMUST00000214505 757 ntBASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhga11Q91XY8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Mir874-201ENSMUST00000104769 76 ntBASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Gm7730-201ENSMUST00000212486 454 ntBASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Pcdhga11Q91XY8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhga11Q91XY8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Gm17330-201ENSMUST00000221047 165 ntBASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhga11Q91XY8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms