Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga4Q91XY4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga4Q91XY4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga4Q91XY4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga4Q91XY4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga4Q91XY4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga4Q91XY4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga4Q91XY4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga4Q91XY4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga4Q91XY4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.14□□□□□ -0.31
Pcdhga4Q91XY4 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga4Q91XY4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga4Q91XY4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Gm26464-201ENSMUST00000157094 305 ntBASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Gm28911-201ENSMUST00000188837 117 ntBASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga4Q91XY4 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Gm17794-201ENSMUST00000220252 955 ntBASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga4Q91XY4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms