Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Usb1Q91W78 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Usb1Q91W78 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Usb1Q91W78 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.19□□□□□ -0.3
Usb1Q91W78 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.19□□□□□ -0.3
Usb1Q91W78 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.19□□□□□ -0.3
Usb1Q91W78 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.19□□□□□ -0.3
Usb1Q91W78 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Pck2-205ENSMUST00000226352 2784 ntBASIC13.19□□□□□ -0.3
Usb1Q91W78 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Usb1Q91W78 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.19□□□□□ -0.3
Usb1Q91W78 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.19□□□□□ -0.3
Usb1Q91W78 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usb1Q91W78 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.18□□□□□ -0.3
Usb1Q91W78 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Gm15806-201ENSMUST00000120696 955 ntBASIC13.18□□□□□ -0.3
Usb1Q91W78 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Usb1Q91W78 Gm9002-201ENSMUST00000178437 499 ntBASIC13.18□□□□□ -0.3
Usb1Q91W78 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.18□□□□□ -0.3
Usb1Q91W78 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.18□□□□□ -0.3
Usb1Q91W78 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.18□□□□□ -0.3
Usb1Q91W78 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.18□□□□□ -0.3
Usb1Q91W78 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.18□□□□□ -0.3
Usb1Q91W78 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.18□□□□□ -0.3
Usb1Q91W78 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.18□□□□□ -0.3
Usb1Q91W78 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Usb1Q91W78 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Usb1Q91W78 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.18□□□□□ -0.3
Usb1Q91W78 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usb1Q91W78 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.17□□□□□ -0.3
Usb1Q91W78 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usb1Q91W78 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Usb1Q91W78 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usb1Q91W78 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Gm11524-201ENSMUST00000119349 807 ntBASIC13.17□□□□□ -0.3
Usb1Q91W78 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Usb1Q91W78 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.17□□□□□ -0.3
Usb1Q91W78 Gm18187-201ENSMUST00000196476 984 ntBASIC13.17□□□□□ -0.3
Usb1Q91W78 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.17□□□□□ -0.3
Usb1Q91W78 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usb1Q91W78 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms