Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Gm13461-201ENSMUST00000120980 662 ntBASIC13.13□□□□□ -0.31
Vsx1Q91V10 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Mospd4-201ENSMUST00000180618 576 ntBASIC13.13□□□□□ -0.31
Vsx1Q91V10 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Gm37986-201ENSMUST00000193285 383 ntBASIC13.13□□□□□ -0.31
Vsx1Q91V10 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.13□□□□□ -0.31
Vsx1Q91V10 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vsx1Q91V10 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Gm14263-201ENSMUST00000117955 746 ntBASIC13.12□□□□□ -0.31
Vsx1Q91V10 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Gm24514-201ENSMUST00000174961 285 ntBASIC13.12□□□□□ -0.31
Vsx1Q91V10 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.12□□□□□ -0.31
Vsx1Q91V10 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Gm45186-201ENSMUST00000206874 478 ntBASIC13.12□□□□□ -0.31
Vsx1Q91V10 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.12□□□□□ -0.31
Vsx1Q91V10 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vsx1Q91V10 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.11□□□□□ -0.31
Vsx1Q91V10 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.11□□□□□ -0.31
Vsx1Q91V10 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Mir5120-201ENSMUST00000175020 78 ntBASIC13.11□□□□□ -0.31
Vsx1Q91V10 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.11□□□□□ -0.31
Vsx1Q91V10 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vsx1Q91V10 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.11□□□□□ -0.31
Vsx1Q91V10 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms