Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rpa1Q8VEE4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Mir874-201ENSMUST00000104769 76 ntBASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Gm10175-201ENSMUST00000086013 645 ntBASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rpa1Q8VEE4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Gm2213-201ENSMUST00000197485 688 ntBASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rpa1Q8VEE4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rpa1Q8VEE4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms