Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Gm37917-201ENSMUST00000194711 392 ntBASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Gm5186-201ENSMUST00000218781 920 ntBASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim29Q8R2Q0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim29Q8R2Q0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim29Q8R2Q0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trim29Q8R2Q0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim29Q8R2Q0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim29Q8R2Q0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim29Q8R2Q0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Gm12341-201ENSMUST00000119724 503 ntBASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Gm2423-201ENSMUST00000074863 733 ntBASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim29Q8R2Q0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Gm12859-201ENSMUST00000117834 427 ntBASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Gm29608-201ENSMUST00000190444 463 ntBASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim29Q8R2Q0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.18■□□□□ 0.02
Trim29Q8R2Q0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms