Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Gm15920-201ENSMUST00000118998 402 ntBASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Gm14719-201ENSMUST00000121891 340 ntBASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cchcr1Q8K2I2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cchcr1Q8K2I2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Gm12151-201ENSMUST00000121374 290 ntBASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Gm15376-201ENSMUST00000122258 783 ntBASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Gm28760-201ENSMUST00000185995 736 ntBASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.73■□□□□ 0.11
Cchcr1Q8K2I2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms