Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Gm29741-201ENSMUST00000192667 421 ntBASIC13.42□□□□□ -0.26
Clip4Q8CI96 Gm45668-201ENSMUST00000211271 493 ntBASIC13.42□□□□□ -0.26
Clip4Q8CI96 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Mir497b-201ENSMUST00000093601 125 ntBASIC13.42□□□□□ -0.26
Clip4Q8CI96 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.41□□□□□ -0.26
Clip4Q8CI96 Gm18018-201ENSMUST00000198273 408 ntBASIC13.41□□□□□ -0.26
Clip4Q8CI96 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.41□□□□□ -0.26
Clip4Q8CI96 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.41□□□□□ -0.26
Clip4Q8CI96 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.41□□□□□ -0.26
Clip4Q8CI96 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Clip4Q8CI96 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.41□□□□□ -0.26
Clip4Q8CI96 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.41□□□□□ -0.26
Clip4Q8CI96 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Clip4Q8CI96 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Gm11424-201ENSMUST00000121929 829 ntBASIC13.4□□□□□ -0.26
Clip4Q8CI96 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Gm24420-201ENSMUST00000176676 59 ntBASIC13.4□□□□□ -0.26
Clip4Q8CI96 Gm2445-201ENSMUST00000182798 989 ntBASIC13.4□□□□□ -0.26
Clip4Q8CI96 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Gm18624-201ENSMUST00000220966 658 ntBASIC13.4□□□□□ -0.26
Clip4Q8CI96 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clip4Q8CI96 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms