Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Gm16177-201ENSMUST00000120728 718 ntBASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Gm29705-201ENSMUST00000212598 474 ntBASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rbm28Q8CGC6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Rbm28Q8CGC6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rbm28Q8CGC6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rbm28Q8CGC6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rbm28Q8CGC6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rbm28Q8CGC6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Rbm28Q8CGC6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Gm42693-201ENSMUST00000196779 631 ntBASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbm28Q8CGC6 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Gm12203-201ENSMUST00000118235 598 ntBASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Gm12209-201ENSMUST00000120089 596 ntBASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Gm45331-201ENSMUST00000209868 554 ntBASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.69■□□□□ 0.1
Rbm28Q8CGC6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.68■□□□□ 0.1
Rbm28Q8CGC6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbm28Q8CGC6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms