Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Gm22175-201ENSMUST00000175007 78 ntBASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Gm27430-201ENSMUST00000184585 107 ntBASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Gm44333-201ENSMUST00000197168 107 ntBASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Chmp2bQ8BJF9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Chmp2bQ8BJF9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Chmp2bQ8BJF9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Gm14701-201ENSMUST00000117156 348 ntBASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Gm14767-201ENSMUST00000121559 586 ntBASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Gm6736-201ENSMUST00000166583 948 ntBASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Gm27680-201ENSMUST00000184192 160 ntBASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp2bQ8BJF9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chmp2bQ8BJF9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms