Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ubfd1Q78JW9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Gm11637-201ENSMUST00000120601 592 ntBASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Gm42693-201ENSMUST00000196779 631 ntBASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ubfd1Q78JW9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Gm23931-201ENSMUST00000103842 109 ntBASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Gm8805-201ENSMUST00000117848 313 ntBASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubfd1Q78JW9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms