Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Gm38144-201ENSMUST00000192790 465 ntBASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.53■□□□□ 0.08
Smarcc2Q6PDG5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Gm29608-201ENSMUST00000190444 463 ntBASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smarcc2Q6PDG5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smarcc2Q6PDG5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smarcc2Q6PDG5 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.5■□□□□ 0.07
Smarcc2Q6PDG5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc2Q6PDG5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc2Q6PDG5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc2Q6PDG5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smarcc2Q6PDG5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms