Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Arhgef40Q3UPH7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Arhgef40Q3UPH7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Arhgef40Q3UPH7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Arhgef40Q3UPH7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Arhgef40Q3UPH7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Arhgef40Q3UPH7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Arhgef40Q3UPH7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Arhgef40Q3UPH7 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gm12616-201ENSMUST00000118594 382 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gm14832-201ENSMUST00000121289 322 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 n-R5s14-201ENSMUST00000122688 107 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gm12624-201ENSMUST00000177615 382 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gm12621-201ENSMUST00000177760 382 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gm12615-201ENSMUST00000177970 382 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gm12622-201ENSMUST00000177975 382 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gm12627-201ENSMUST00000178412 382 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gm12625-201ENSMUST00000179122 382 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gm12614-201ENSMUST00000179586 382 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gm12613-201ENSMUST00000180323 382 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gm45691-201ENSMUST00000206905 1120 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Gm44094-201ENSMUST00000204703 2030 ntBASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Arhgef40Q3UPH7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Arhgef40Q3UPH7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Gm8913-201ENSMUST00000209491 641 ntBASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Gm15459-201ENSMUST00000117405 1941 ntBASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Gm8355-201ENSMUST00000177767 1941 ntBASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Arhgef40Q3UPH7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Gm11405-201ENSMUST00000118689 1556 ntBASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Gm43908-201ENSMUST00000205074 1472 ntBASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Gm45770-201ENSMUST00000212105 616 ntBASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 AC125209.1-201ENSMUST00000225812 766 ntBASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Arhgef40Q3UPH7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms